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  • Which technology can profile gene expression across thousands of genes at once?
  • State the central dogma of molecular biology and name a common exception.
  • Which technique is used to produce many copies of a DNA fragment quickly?
  • What is the laboratory technique called that amplifies DNA in vitro by incubating with primers, DNA polymerase, and nucleotides?
  • What is the role of bioinformatics in DNA biotechnology?
  • Which base pairs with Cytosine?
  • What is the purpose of a BLAST search and what outputs would you evaluate?
  • Which enzyme unwinds the DNA double helix during replication and what energy source does it use?
  • What is the basic unit of DNA, and what are the four nucleotides and their complementary base pairs?
  • According to Chargaff's Rule, which base pairing is correct?
  • What is the role of primase in DNA replication?
  • In genetic engineering, a vector is:
  • Which statement best defines bioremediation?
  • Nitrogenous bases in DNA are responsible for what?
  • What term describes regions where replication begins by loading helicase?
  • In many bacterial expression vectors, what is the role of the T7 promoter and lac operator?
  • What enzyme unzips DNA by breaking hydrogen bonds between the two strands?
  • What is a gene?
  • What is the purpose of T4 DNA ligase in cloning, and what is meant by making cells competent for transformation?
  • What is the function of origins of replication?
  • In cloning workflows, transformation applies to bacteria, whereas transfection applies to which cells?
  • PCR can be used to identify SARS-CoV-2 by detecting its genetic material.
  • DNA replication is defined as?
  • Why is the genetic code described as degenerate, and what does the wobble hypothesis propose?
  • Which description correctly defines the lagging strand during DNA replication?
  • What is a major ethical concern with genome editing in humans?
  • If a DNA molecule contains 20% thymine, what percent would cytosine contain?
  • What is a transgenic organism?
  • GM crops can reduce use of broad-spectrum chemical herbicides. Which option best states this?
  • AZT is an example of which class of compounds used to terminate DNA synthesis?
  • Which base pairing is correct in DNA?
  • Which statement best describes common strategies for delivering therapeutic genes and their safety concerns?
  • Enzyme that cuts DNA at a specific sequence of nucleotides is called?
  • What feature of expression vectors allows turning on protein production only when an inducer is present?
  • One environmental benefit commonly associated with GMO crops is:
  • RNA interference operates by which mechanism?
  • What is a major advantage of immobilized enzymes in industrial biocatalysis?
  • When you have too little DNA and need more for research or forensic investigations, PCR is useful. Which option best describes this use?
  • Which statement best describes the central dogma with exceptions?
  • Which epigenetic modification is commonly associated with gene activation in eukaryotes?
  • Which four bases are found in DNA?
  • Name one DNA repair pathway and its purpose.
  • Which factor influences guide RNA design for CRISPR-Cas9?
  • Which statement best describes how lactose and glucose regulate the lac operon in E. coli, including the roles of the lac repressor and CAP-CAMP?
  • Distinguish transformation and transfection.
  • What is the purpose of resuspending DNA at the end of a DNA extraction protocol?
  • Which statement best describes a key advantage of next-generation sequencing over Sanger sequencing?
  • How does Agrobacterium-mediated transformation introduce foreign DNA into plant genomes?
  • How does magnesium ion concentration affect PCR specificity and yield?
  • What does a DNA microarray measure?
  • How does the absence of lactose affect lac operon expression?
  • What does the chain of custody refer to in forensic DNA analysis?
  • How does CRISPR-Cas9 generate targeted genome edits?
  • What type of bond holds the nitrogenous bases together within the DNA double helix?
  • Which statement about DNA methylation and histone acetylation is accurate?
  • Name a common diagnostic application of PCR.
  • Recombinant DNA is DNA produced by which process?
  • What is the purpose of making cells competent?
  • Plasmid copy number mainly affects which aspect in bacterial expression systems?
  • Name an application of biotechnology in medicine.
  • How is replication fidelity maintained and what repair systems correct errors after replication?
  • What strategies exist to minimize CRISPR off-target editing?
  • Which description correctly defines the leading strand during DNA replication?
  • Base pairing across the two DNA strands forms what?
  • Golden rice is engineered to address deficiency of which nutrient?
  • If a DNA molecule contains 20% thymine, what percentage of guanine would it contain?
  • Which statement about high-copy versus low-copy plasmids is true?
  • Which statement best represents the Central Dogma?
  • Which scientist used X-ray crystallography to determine the helical shape of DNA?
  • Name a common PCR inhibitor and a general mitigation strategy.
  • Which term describes DNA produced by combining DNA from different sources?
  • What are key considerations when designing PCR primers?
  • What are the key principles of next-generation sequencing and how does it differ from Sanger sequencing?
  • Which base pairs with Thymine?
  • In forensic DNA analysis, the DNA from the crime scene is compared to which to determine a match?
  • In metagenomic genome assembly from environmental samples, what is a major challenge?
  • Which condition leads to inactivation of the lac repressor and transcription of lac operon genes?
  • Why does replication occur?
  • Which enzyme seals the gaps between Okazaki fragments?
  • Which statement best describes how chromatin remodeling influences transcription?
  • What is the procedure used to separate and analyze DNA fragments by applying an electric field to a gel?
  • State the central dogma of molecular biology.
  • GM crops may lead to higher food yields and better nutrition.
  • After CRISPR-Cas9 creates a double-strand break, what is a likely outcome during cellular repair?
  • What does DNA ligase do in cloning?
  • Which term describes a form of technology that uses living organisms, usually genes, to modify products, or to develop other microorganisms?
  • How is DNA technology used in forensics?
  • How does plasmid origin influence copy number and why does that matter for protein expression?
  • How does DNA packaging into chromatin regulate access for transcription?
  • How is transcription initiated in eukaryotes, and what are the roles of promoters, transcription factors, and enhancers?
  • How can a frameshift mutation affect protein coding?
  • A major benefit of transgenic organisms is the ability to harvest medicines from bacteria; such as insulin production. Which option best describes this benefit?
  • Which product is produced by the transgenic goats?
  • What does DNA contain?
  • Which base pairs with Adenine?
  • Cross-species pollination could spread herbicide resistance genes, creating:
  • Name the lac operon concept and how it regulates gene expression in E. coli.
  • Outline the typical workflow for generating DNA evidence from a crime scene, including sample handling and analysis.
  • How is genetic engineering used in agriculture?
  • PCR is used to?
  • Which enzyme is required to transcribe from a T7 promoter in common bacterial expression strains?
  • In forensic DNA profiling, what is capillary electrophoresis used for?
  • If you run a PCR product on a 1% agarose gel with a ladder and observe a single clear band at 900 bp, what does this indicate?
  • A potential health risk of GM crops is:
  • Which temperature is used for denaturation in PCR?
  • Which proteins keep the DNA strands separated so they do not bind back together?
  • Gel electrophoresis separates DNA fragments primarily by what property?
  • Which enzyme relieves strain in the double helix by preventing supercoiling ahead of the replication fork?
  • Which statement correctly describes the function of telomerase?
  • Okazaki fragments are produced on the lagging strand during DNA replication. Which statement is true?
  • An immobilized enzyme is characterized by which statement?
  • What are key ethical considerations in editing human embryos and what regulatory concerns exist?
  • What are point mutations and insertions/deletions (indels)?
  • What is the typical outcome of Agrobacterium-mediated transformation in plants?
  • What is the shape of DNA?
  • Which statement describes a transgenic organism specifically engineered to produce human insulin?
  • What does semi-conservative replication mean?
  • Which statement correctly summarizes Chargaff's rule?
  • Which statement about the function of bioinformatics in DNA biotechnology is most accurate?
  • Differentiate a gene knockout from a knock-in allele and give a use case for each.
  • Sanger sequencing utilizes chain-terminating dideoxynucleotides. Which statement correctly describes its limitation?
  • How can biotechnology accelerate vaccine development?
  • What are major ethical considerations in biotechnology and how are GMO regulations usually structured?
  • In retroviruses, which statement describes how RNA is converted to DNA and what happens after integration?
  • Which base pairs with Guanine?
  • What are off-target effects in genome editing and why are they a concern?
  • Which statement best describes the role of DNA in a cell?
  • What is the function of the 5' cap and 3' poly-A tail in mRNA processing?
  • What genetic markers are commonly used in forensic DNA fingerprinting and how are they analyzed?
  • Name one ethical consideration in biotechnology research.
  • GM crops might have unforeseen effects on:
  • Which enzyme synthesizes a new DNA strand by adding nucleotides to the template during replication?
  • What are common CRISPR delivery methods, and what are the trade-offs of plasmid-based vs ribonucleoprotein (RNP) delivery?
  • Which statement best describes the principle behind gel electrophoresis?
  • How does Sanger sequencing determine DNA sequence, and what is the role of ddNTPs?
  • What is the role of DNA primase in replication?
  • Genomic imprinting affects gene expression in a development context. Which statement best describes imprinting?
  • What is the name of the rule that states A pairs with T and C pairs with G?
  • Which enzyme connects two fragments of DNA to make a single fragment?
  • What proteins coordinate mismatch repair in bacteria and what is the outcome of this repair?
  • Distinguish leading and lagging strand synthesis.
  • In semi-conservative replication, what is the composition of each daughter DNA molecule?
  • Which component of an expression vector is used to select for cells that have taken up the plasmid?
  • Which group modeled and published the structure of DNA?
  • What makes up the backbone (sides) of a DNA molecule?
  • Which DNA fragment bands moved faster and farther in a gel electrophoresis?
  • What problem do telomeres solve and which enzyme extends them?
  • Which statement about primer melting temperature (Tm) is true in PCR primer design?
  • What is the role of tRNA in translation?
  • Which RNA processing steps occur in eukaryotes after transcription?
  • What are the main features of translation initiation and the roles of the ribosome A, P, and E sites?
  • Which statement best describes semiconservative replication?
  • If a DNA molecule contains 20% thymine, how much adenine would it contain?
  • Name the main enzymes involved in bacterial DNA replication and briefly state their roles.
  • What is DNA methylation and how does it influence gene expression?
  • What best describes base pairing in DNA?
  • Which phase of the cell cycle involves DNA synthesis?
  • After cloning, colony PCR is used for which purpose?
  • Which option correctly describes reverse transcriptase activity in RT-PCR workflows?
  • Which statement best contrasts Sanger sequencing with next-generation sequencing?
  • Explain the difference between the leading and lagging strands during DNA replication and the role of Okazaki fragments.
  • Which enzyme relieves torsional strain ahead of the replication fork?
  • Bt corn contains genes from which organism that produces insecticidal proteins?
  • Which enzyme seals nicks between Okazaki fragments on the lagging strand?
  • What are the common regulatory steps GMOs undergo?
  • DNA polymerase synthesizes new DNA in which direction relative to the template strand?
  • Name and briefly describe two major base damage repair pathways.
  • Which statement best describes how STR data are used to identify individuals?
  • What are the typical primer length and the main steps of a PCR cycle?
  • Which statement correctly defines complementary strands?
  • Which statement correctly describes the direction of DNA synthesis by DNA polymerase?
  • What is the replication fork?
  • Name one mechanism of gene regulation in eukaryotes.
  • Which statement best differentiates biotechnology from genetic engineering?
  • Okazaki fragments are best described as:
  • What sugar is in the backbone of DNA?
  • What promoter elements define bacterial transcription initiation and which sigma factor recognizes them?
  • Which term describes the technology that includes the process of manipulating genetic material to achieve desirable functions not occurring naturally?
  • What is a nucleotide?
  • Why are Okazaki fragments necessary?
  • Which of the following is a medical use of transgenic organisms?
  • Golden rice is engineered to produce and store which nutrient in the grain?
  • Which RNA processing step removes introns from pre-mRNA in eukaryotic cells?
  • How does agarose concentration influence the separation of DNA fragments in gel electrophoresis?
  • In semiconservative replication, what is the relationship between the two strands in each daughter DNA molecule?
  • Which statement best defines a GMO?
  • In RT-PCR, what is the role of reverse transcriptase?
  • What is the goal of gene therapy?
  • In gel electrophoresis, what is the purpose of a DNA ladder?
  • What is a plasmid?
  • What features must a cloning vector have to enable gene cloning and propagation in bacteria?
  • Describe the anti-parallel orientation of double-stranded DNA and the significance of 5' to 3' directionality for synthesis.
  • What is the role of restriction endonucleases in cloning?
  • Which components make up the backbone of DNA?
  • Which feature enables a plasmid to be replicated and propagated in bacterial cells?
  • Which type of DNA lesion is primarily repaired by nucleotide excision repair?
  • During PCR, what is the typical temperature used for the extension step with a DNA polymerase?
  • Which feature does an expression vector have that makes it suitable for protein production?
  • Where does transcription occur in eukaryotic cells?
  • Which enzyme joins individual nucleotides to replicate a DNA molecule and proofreads?
  • DNA stands for what phrase?
  • What is a reporter gene and why is GFP frequently used?
  • What are sticky ends and blunt ends, and why are sticky ends often preferred for cloning?
  • What is the role of gel electrophoresis in genetic analysis?
  • How does CRISPR-Cas9 achieve targeted genome editing and what is the role of the PAM sequence?
  • Restriction enzymes cut DNA at specific sequences called what?
  • Where does translation occur and what is the genetic code?
  • What type of bonds hold the nitrogenous bases together across the two DNA strands?
  • Name two classes of compounds that inhibit DNA replication or transcription, and give an example of each.
  • Which sequence of steps correctly describes a standard DNA extraction protocol from cultured cells?
  • Which of the following is NOT a typical consideration when designing PCR primers?
  • Which components make up a DNA nucleotide?
  • In CRISPR guide RNA design, why is GC content considered?
  • What key processing steps convert a primary transcript into mature eukaryotic mRNA?
  • What is the term for the pairing of complementary bases in DNA?
  • What is a plasmid and why is it used in cloning?
  • Okazaki fragments are small fragments of DNA produced on which strand during DNA replication, and are later joined by ligase to form a continuous strand?
  • If the PAM sequence is mutated, what is the likely effect on Cas9-mediated cutting?
  • What are the key steps in producing recombinant human insulin in bacteria?
  • Which type of genetic markers are commonly used in human DNA profiling for forensics?
  • What is the Kozak sequence and why is it important?
  • In the lac operon, which statement accurately captures the roles of LacI and CAP in transcription regulation?
  • In a eukaryotic cell, where is DNA located?
  • Which statement describes the process of creating a transgenic organism?
  • What is the general workflow of RT-PCR when detecting RNA viruses?
  • Which enzyme removes RNA primers and replaces them with DNA during replication?
  • How does DNA polymerase ensure fidelity during replication?
  • What is the Ct value in quantitative PCR and how does it relate to starting template amount?
  • What is the purpose of gel electrophoresis?
  • Which molecule contains the genetic code that determines the sequence of amino acids in proteins?
  • What is the primary difference between a cloning vector and an expression vector?
  • What base pairing pattern is observed in the DNA double helix?
  • Where does translation occur?
  • What is metagenomics and what challenges are associated with assembling genomes from environmental samples?
  • What does the origin of replication in a plasmid enable?
  • What is the chemical backbone of DNA and which bases pair with which?
  • Which sequence describes the flow of genetic information?
  • Which statement best describes how RNA interference regulates gene expression?
  • If thymine is 30%, what percent adenine would the DNA contain?
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